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Multidimensional View of Amyloid Fibril Nucleation in Atomistic DetailBaftizadeh, Fahimeh; Biarnes, Xevi; Pietrucci, Fabio; Affinito, Fabio; Laio, Alessandro · 2012
Simulation of Amyloid Nucleation with Bias-Exchange MetadynamicsBaftizadeh Baghal, Fahimeh; Biarnes, Xevi; Pietrucci, Fabio; Laio, Alessandro; Affinito, Fabio · Biophysical Journal · 2012
Metadynamics convergence law in a multidimensional systemCrespo, Yanier; Marinelli, Fabrizio; Pietrucci, Fabio; Laio, Alessandro · 2010
METAGUI. A VMD interface for analyzing metadynamics and molecular dynamics simulationsXevi Biarnés; Fabio Pietrucci; Fabrizio Marinelli; Alessandro Laio · 2012
Exploring the Universe of Protein Structures beyond the Protein Data BankCossio, Pilar; Trovato, Antonio; Pietrucci, Fabio; Seno, Flavio; Maritan, Amos; Laio, Alessandro; Lai, Luhua · PLoS Computational Biology · 2010
Protein Folding and Ligand-Enzyme Binding from Bias-Exchange Metadynamics SimulationsBaftizadeh, Fahimeh; Cossio, Pilar; Pietrucci, Fabio; Laio, Alessandro · Current Physical Chemistry · 2012
Insights On Protein Structure And Dynamics From Multiple Biased Molecular Dynamics SimulationsMarinelli, Fabrizio; Piana, Stefano; Pietrucci, Fabio; Torodova, Nevena; Yarovsky, Irene; Laio, Alessandro · Biophysical Journal · 2009
Substrate Binding Mechanism of HIV-1 Protease from Explicit-Solvent Atomistic SimulationsPietrucci, Fabio; Marinelli, Fabrizio; Carloni, Paolo; Laio, Alessandro · Journal of the American Chemical Society · 2009
Gaussian Expansions of OrbitalsMcKemmish, Laura K.; Gill, Peter M. W. · Journal of Chemical Theory and Computation · 2012
Free Energy Guided SamplingZhou, Ting; Caflisch, Amedeo · Journal of Chemical Theory and Computation · 2012
On Reaction Coordinate OptimalityKrivov, Sergei V. · Journal of Chemical Theory and Computation · 2013
Metadynamics with Adaptive GaussiansBranduardi, Davide; Bussi, Giovanni; Parrinello, Michele · Journal of Chemical Theory and Computation · 2012
Symmetry Conservation in Fukui FunctionsFlores-Moreno, Roberto · Journal of Chemical Theory and Computation · 2010
Transient Polymorphism in NaClGiberti, Federico; Tribello, Gareth A.; Parrinello, Michele · Journal of Chemical Theory and Computation · 2013
Developments in Theoretical ChemistryMcCoy, Anne B.; Scuseria, Gustavo E. · Journal of Chemical Theory and Computation · 2014
Connecting Pauling and Mulliken ElectronegativitiesHerrick, David R. · Journal of Chemical Theory and Computation · 2005